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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8142939 chr22:44745442 C/T POLR3H chr22:41921808-41940610:- -0.69 -7.89 2.15E-14 Box Plot
THCA rs8142939 chr22:44745442 C/T PPIL2 chr22:22020298-22054304:+ -0.53 -6.09 2.3E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T RPL3 chr22:39708887-39716394:- -0.52 -5.98 4.34E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T TAB1 chr22:39795746-39833065:+ -0.57 -5.9 6.99E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T TOP3B chr22:22311397-22337213:- -0.45 -5.93 5.7E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T TUBGCP6 chr22:50656118-50683421:- -0.43 -6.52 1.84E-10 Box Plot
THCA rs8142939 chr22:44745442 C/T TXN2 chr22:36863083-36878077:- -0.51 -6.65 7.8E-11 Box Plot
THCA rs8142939 chr22:44745442 C/T UBE2L3 chr22:21903736-21978323:+ -0.51 -6.19 1.3E-9 Box Plot
THCA rs8142939 chr22:44745442 C/T UQCR10 chr22:30163358-30166402:+ -0.39 -6.21 1.17E-9 Box Plot
THCA rs8143019 chr22:24057485 C/T IGLL3 chr22:25713888-25716191:+ 0.72 9.69 2.1E-20 Box Plot
THCA rs814359 chr8:9883132 T/G SGK223 chr8:8175258-8244008:- 0.37 7.23 1.95E-12 Box Plot
THCA rs816508 chr3:39469546 C/A RPSAP58 chr19:23964883-24010937:+ -0.22 -6.05 2.91E-9 Box Plot
THCA rs8175378 chr5:49478710 T/C LOC647121 chr1:121260910-121313686:+ -0.35 -7.37 7.32E-13 Box Plot
THCA rs8175383 chr5:46325385 A/C LOC647121 chr1:121260910-121313686:+ -0.37 -8 9.45E-15 Box Plot
THCA rs8175395 chr5:46125600 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.97 1.17E-14 Box Plot